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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_4942PFAM: isochorismatase hydrolase; KEGG: cvi:CV4239 probable amidase from nicotinamidase family. (186 aa)    
Predicted Functional Partners:
Mvan_4939
PFAM: Thiolase; KEGG: mbo:Mb0938c acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
   0.748
Mvan_4941
PFAM: helix-turn-helix, HxlR type; KEGG: mmc:Mmcs_3097 transcriptional regulator, HxlR family.
  
    0.733
Mvan_4940
PFAM: Carotenoid oxygenase; KEGG: mtc:MT0938 dioxygenase, putative.
     
 0.713
Mvan_4943
PFAM: heat shock protein Hsp20; KEGG: mmc:Mmcs_4380 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
  
  
 0.634
Mvan_1787
TIGRFAM: isochorismate synthases; PFAM: Anthranilate synthase component I and chorismate binding protein; KEGG: mmc:Mmcs_1387 isochorismate synthases.
    
 0.532
Mvan_1859
PFAM: isochorismatase hydrolase; KEGG: mmc:Mmcs_3544 isochorismatase hydrolase.
  
     0.523
Mvan_0893
PFAM: isochorismatase hydrolase; KEGG: bxe:Bxe_C0259 isochorismatase hydrolase family protein.
  
     0.496
Mvan_4938
PFAM: ANTAR domain protein; KEGG: mmc:Mmcs_4379 response regulator receiver and ANTAR domain protein.
       0.483
Mvan_0972
Transcriptional regulator, AraC family with amidase-like domain; PFAM: helix-turn-helix- domain containing protein, AraC type; ThiJ/PfpI domain protein; KEGG: mmc:Mmcs_0747 transcriptional regulator, AraC family.
 
    0.479
gpsA
Glycerol-3-phosphate dehydrogenase (NAD(P)(+)); PFAM: NADP oxidoreductase, coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: mmc:Mmcs_0774 glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 
 0.470
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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