STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_4951PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mbo:Mb0935 hypothetical protein. (280 aa)    
Predicted Functional Partners:
Mvan_4945
KEGG: mmc:Mmcs_4381 hypothetical protein.
     
 0.699
Mvan_5883
PFAM: Radical SAM domain protein; KEGG: mtc:MT1721 MoaA-related protein.
  
    0.625
Mvan_5027
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_4461 glyoxalase/bleomycin resistance protein/dioxygenase.
  
  
 0.595
Mvan_4952
PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_4394 amidohydrolase 2.
       0.576
Mvan_3613
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_3336 lyase.
 
  
 0.499
Mvan_5469
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_4874 methyltransferase type 12.
 
     0.490
Mvan_0147
PFAM: Pirin domain protein domain protein; KEGG: mmc:Mmcs_0135 pirin-like protein; Belongs to the pirin family.
     
 0.488
Mvan_4953
PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_4395 aldehyde dehydrogenase.
     
 0.469
Mvan_4950
PFAM: beta-ketoacyl synthase; KEGG: mmc:Mmcs_3367 beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.463
Mvan_4956
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_4398 acyl-CoA dehydrogenase-like protein.
  
    0.445
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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