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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_4965Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: mmc:Mmcs_4409 transcriptional regulator, GntR family. (247 aa)    
Predicted Functional Partners:
Mvan_4964
PFAM: NHL repeat containing protein; SMP-30/Gluconolaconase/LRE domain protein; KEGG: mmc:Mmcs_4408 NHL repeat.
 
   
 0.890
Mvan_4967
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4411 short-chain dehydrogenase/reductase SDR.
 
     0.889
Mvan_4966
PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_4410 AMP-dependent synthetase and ligase.
 
     0.882
Mvan_4968
PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_4412 AMP-dependent synthetase and ligase.
 
     0.874
Mvan_3927
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: mmc:Mmcs_3531 transcriptional regulator, GntR family.
  
     0.767
Mvan_5574
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; protein of unknown function UPF0074; UbiC transcription regulator-associated domain protein; KEGG: mmc:Mmcs_0189 transcriptional regulator, GntR family.
  
     0.767
Mvan_2288
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; Helix-turn-helix, type 11 domain protein; KEGG: dra:DRA0211 transcriptional regulator, GntR family.
  
     0.766
Mvan_0056
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: rha:RHA1_ro06603 probable transcriptional regulator.
  
     0.753
Mvan_4963
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4407 short-chain dehydrogenase/reductase SDR.
       0.721
Mvan_4015
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: sma:SAV1984 GntR-family transcriptional regulator.
  
     0.717
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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