STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_4974MorD; KEGG: mmc:Mmcs_4417 MorD. (510 aa)    
Predicted Functional Partners:
Mvan_4975
PFAM: ATPase associated with various cellular activities, AAA_5; CbbQ/NirQ/NorQ C-terminal domain protein; KEGG: mmc:Mmcs_4418 ATPase associated with various cellular activities, AAA_5.
 
 
 0.986
Mvan_4196
PFAM: ATPase associated with various cellular activities, AAA_5; CbbQ/NirQ/NorQ C-terminal domain protein; KEGG: mmc:Mmcs_3726 ATPase associated with various cellular activities, AAA_5.
 
 
 0.899
Mvan_4973
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4416 transcriptional regulator, TetR family.
 
     0.797
Mvan_4220
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3755 transcriptional regulator, TetR family.
  
     0.734
Mvan_1513
Transcriptional regulator, TetR family; PFAM: regulatory protein, TetR; KEGG: mpa:MAP1788 hypothetical protein.
 
     0.699
Mvan_4172
KEGG: mpa:MAP0732c hypothetical protein.
  
     0.655
Mvan_2603
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_2300 transcriptional regulator, TetR family.
  
     0.643
Mvan_0817
KEGG: mmc:Mmcs_3793 hypothetical protein.
  
     0.620
Mvan_0818
KEGG: mmc:Mmcs_3792 hypothetical protein.
  
     0.581
Mvan_4977
KEGG: mmc:Mmcs_4419 hypothetical protein.
       0.579
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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