STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_5258PFAM: cytochrome P450; KEGG: mmc:Mmcs_4677 cytochrome P450. (419 aa)    
Predicted Functional Partners:
Mvan_4635
3-beta hydroxysteroid dehydrogenase/isomerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KR; KEGG: mmc:Mmcs_4109 3-beta hydroxysteroid dehydrogenase/isomerase.
  
 0.923
Mvan_5217
PFAM: cytochrome P450; KEGG: mmc:Mmcs_4631 cytochrome P450.
  
  
0.923
Mvan_1514
PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: mbo:Mb3443c probable cholesterol oxidase precursor ChoD (cholesterol-O2 oxidoreductase).
    
 0.909
Mvan_5151
PFAM: cytochrome P450; KEGG: mmc:Mmcs_4572 cytochrome P450.
  
  
 
0.902
Mvan_3012
PFAM: cytochrome P450; KEGG: mpa:MAP1614c putative cytochrome P450.
  
  
 
0.901
Mvan_3124
PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR; KEGG: mbo:Mb2959 phenolpthiocerol synthesis type-I polyketide synthase PpsD.
  
 0.878
Mvan_3126
PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR; KEGG: mmc:Mmcs_2835 beta-ketoacyl synthase.
  
 0.878
Mvan_5640
Mycolic acid condensase; PFAM: beta-ketoacyl synthase; Thioesterase; acyl transferase domain protein; phosphopantetheine-binding; KEGG: mmc:Mmcs_5010 beta-ketoacyl synthase.
  
 0.865
Mvan_5215
PFAM: AMP-dependent synthetase and ligase; KEGG: mpa:MAP0550 Acyl-CoA synthetase.
 
 0.817
Mvan_5256
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_4675 acyl-CoA dehydrogenase-like protein.
 
 
 0.810
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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