STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_5599PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_4965 binding-protein-dependent transport systems inner membrane component. (226 aa)    
Predicted Functional Partners:
Mvan_5600
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_4966 ABC transporter related.
 
 0.999
Mvan_5601
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: mmc:Mmcs_4967 substrate-binding region of ABC-type glycine betaine transport system.
 
 0.999
Mvan_5598
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_4964 binding-protein-dependent transport systems inner membrane component.
 
 
0.997
Mvan_5597
PFAM: protein of unknown function DUF1089; KEGG: mmc:Mmcs_4963 protein of unknown function DUF1089.
       0.866
Mvan_4480
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: mmc:Mmcs_3976 substrate-binding region of ABC-type glycine betaine transport system.
 
  
 0.846
Mvan_5602
KEGG: mmc:Mmcs_4968 hypothetical protein.
       0.712
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.