STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_5695PFAM: luciferase family protein; KEGG: mmc:Mmcs_5063 luciferase-like protein. (286 aa)    
Predicted Functional Partners:
Mvan_4383
PFAM: luciferase family protein; KEGG: mmc:Mmcs_3907 luciferase-like protein.
  
     0.717
Mvan_1733
LPPG:FO 2-phospho-L-lactate transferase; TIGRFAM: LPPG; PFAM: protein of unknown function UPF0052 and CofD; KEGG: mmc:Mmcs_1324 LPPG:Fo 2-phospho-L-lactate transferase.
 
   
 0.686
Mvan_4198
PFAM: luciferase family protein; KEGG: mmc:Mmcs_3731 luciferase-like protein.
  
     0.680
Mvan_5840
Hypothetical protein; PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mpa:MAP0126 hypothetical protein.
  
   
 0.666
Mvan_5219
PFAM: luciferase family protein; KEGG: mmc:Mmcs_4633 luciferase-like protein.
  
     0.641
Mvan_4259
PFAM: luciferase family protein; KEGG: mmc:Mmcs_3824 luciferase-like protein.
  
     0.620
Mvan_0261
PFAM: luciferase family protein; KEGG: nfa:nfa26250 hypothetical protein.
  
     0.602
Mvan_4457
Hypothetical protein; PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mmc:Mmcs_3955 hypothetical protein.
  
   
 0.602
Mvan_1732
Coenzyme F420-0 gamma-glutamyl ligase; TIGRFAM: F420-dependent oxidoreductase, putative; PFAM: nitroreductase; protein of unknown function DUF129; KEGG: mmc:Mmcs_1323 uncharacterised conserved protein UCP005026.
 
  
 0.593
Mvan_2616
Hypothetical protein; PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mmc:Mmcs_2315 hypothetical protein.
  
   
 0.592
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.