STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsmG16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of guanine in position 518 of 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. (227 aa)    
Predicted Functional Partners:
Mvan_6072
Chromosome segregation ATPase; PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: mmc:Mmcs_5407 cobyrinic acid a,c-diamide synthase.
  
  
 0.969
Mvan_6071
Chromosome segregation DNA-binding protein; TIGRFAM: parB-like partition proteins; PFAM: ParB domain protein nuclease; KEGG: mmc:Mmcs_5406 ParB-like partition proteins; Belongs to the ParB family.
  
  
 0.965
Mvan_6074
PFAM: single-stranded nucleic acid binding R3H domain protein; KEGG: mmc:Mmcs_5409 single-stranded nucleic acid binding R3H.
  
  
 0.906
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
  
  
 0.883
Mvan_3290
TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: mmc:Mmcs_2951 hemolysin A.
  
   
 0.843
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  
 0.825
rpsL
SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy.
     
 0.822
Mvan_6075
PFAM: 60 kDa inner membrane insertion protein; KEGG: mmc:Mmcs_5410 60 kDa inner membrane insertion protein.
  
  
 0.798
Mvan_5632
PFAM: cell wall arabinan synthesis protein; KEGG: mmc:Mmcs_5005 cell wall arabinan synthesis protein.
  
  
 0.717
rpmH
PFAM: ribosomal protein L34; KEGG: mmc:Mmcs_5413 ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.
  
  
 0.713
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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