STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Clos_0091PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: amt:Amet_3091 acyl-CoA dehydrogenase domain protein. (379 aa)    
Predicted Functional Partners:
Clos_0165
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: cdf:CD0800 3-hydroxybutyryl-CoA dehydratase (crotonase).
 
 0.994
Clos_0090
PFAM: MaoC domain protein dehydratase; KEGG: cbe:Cbei_3349 MaoC domain protein dehydratase.
 
 0.984
Clos_0093
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: amt:Amet_3089 electron transfer flavoprotein, alpha/beta-subunit-like protein.
 
 0.971
Clos_0084
KEGG: cbe:Cbei_0411 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.970
Clos_0092
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: amt:Amet_3090 electron transfer flavoprotein, alpha/beta-subunit-like protein.
 
 
 0.970
Clos_0258
KEGG: amt:Amet_4630 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.966
Clos_2444
TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: rpc:RPC_0636 acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.966
Clos_1346
PFAM: MaoC domain protein dehydratase; KEGG: tte:TTE0551 predicted acyl dehydratase.
 
 0.956
Clos_0441
Sodium pump decarboxylase, gamma subunit; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the OadG family.
  
 
 0.941
Clos_0088
PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: amt:Amet_4523 3-hydroxybutyryl-CoA dehydrogenase.
 
 0.939
Your Current Organism:
Alkaliphilus oremlandii
NCBI taxonomy Id: 350688
Other names: A. oremlandii OhILAs, Alkaliphilus oremlandii OhILAs, Alkaliphilus oremlandii str. OhILAs, Alkaliphilus oremlandii strain OhILAs, Clostridium oremlandii OhILAs, Clostridium sp. OhILAs
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