STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Clos_0802PFAM: microcompartments protein; KEGG: lwe:lwe1138 propanediol/ethanolamine utilization protein. (97 aa)    
Predicted Functional Partners:
Clos_0806
PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: ssa:SSA_0529 ethanolamine utilization protein, putative.
 
 
 
 0.940
Clos_0371
PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: amt:Amet_4575 ethanolamine utilization protein EutN/carboxysome structural protein CcmL.
 
 
 
 0.882
Clos_2392
PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: cbo:CBO2111 ethanolamine utilization protein.
 
 
 
 0.867
Clos_0799
PFAM: microcompartments protein; KEGG: efa:EF1626 ethanolamine utilization protein EutL.
  
  
 0.676
Clos_0801
TIGRFAM: acetaldehyde dehydrogenase (acetylating); PFAM: aldehyde dehydrogenase; KEGG: ssa:SSA_0523 aldehyde dehydrogenase, putative.
  
  
 0.652
Clos_0800
PFAM: microcompartments protein; KEGG: efa:EF1625 microcompartment protein family.
 
   
0.650
Clos_0804
Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.
  
  
 0.593
Clos_0803
Hypothetical protein; KEGG: lmo:lmo1181 similar to cobalamin adenosyl transferase.
  
  
 0.575
Clos_0805
Hypothetical protein; KEGG: ssa:SSA_0528 conserved uncharacterized protein.
  
    0.569
Clos_0807
PFAM: Ethanolamine utilisation protein EutH; KEGG: efa:EF1618 ethanolamine utilization protein EutH.
  
  
 0.508
Your Current Organism:
Alkaliphilus oremlandii
NCBI taxonomy Id: 350688
Other names: A. oremlandii OhILAs, Alkaliphilus oremlandii OhILAs, Alkaliphilus oremlandii str. OhILAs, Alkaliphilus oremlandii strain OhILAs, Clostridium oremlandii OhILAs, Clostridium sp. OhILAs
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