STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Clos_1148PFAM: sodium/hydrogen exchanger; KEGG: cdf:CD0657 putative Na(+)/H(+) antiporter. (390 aa)    
Predicted Functional Partners:
Clos_2091
PFAM: sodium/hydrogen exchanger; KEGG: cbo:CBO2772 Na(+)/H(+) antiporter.
 
 
 
0.576
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
 
   
 0.562
Clos_0080
PFAM: dihydropteroate synthase DHPS; homocysteine S-methyltransferase; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; KEGG: cbo:CBO1623 methionine synthase.
     
 0.548
Clos_2294
PFAM: metallophosphoesterase; SMART: serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase; KEGG: tva:TVAG_405950 Ser/Thr protein phosphatase, putative.
    
 
 0.537
Clos_1149
KEGG: sth:STH2523 conserved domain protein, histidine-rich.
       0.436
Clos_1146
Hypothetical protein.
       0.434
Clos_1147
Hypothetical protein.
       0.434
Clos_0255
TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: oih:OB0443 hypothetical conserved protein.
   
 
 0.417
Clos_2053
TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; calcium-translocating P-type ATPase, PMCA-type; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: ddi:DDB_0233096 P-type ATPase.
   
 
 0.416
Clos_2092
KEGG: cth:Cthe_1401 hypothetical protein.
 
    0.415
Your Current Organism:
Alkaliphilus oremlandii
NCBI taxonomy Id: 350688
Other names: A. oremlandii OhILAs, Alkaliphilus oremlandii OhILAs, Alkaliphilus oremlandii str. OhILAs, Alkaliphilus oremlandii strain OhILAs, Clostridium oremlandii OhILAs, Clostridium sp. OhILAs
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