node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Clos_1526 | Clos_1530 | Clos_1526 | Clos_1530 | PFAM: protein of unknown function DUF448; KEGG: cth:Cthe_0993 protein of unknown function DUF448. | PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cth:Cthe_0989 phosphoesterase, RecJ-like protein. | 0.815 |
Clos_1526 | Clos_1532 | Clos_1526 | Clos_1532 | PFAM: protein of unknown function DUF448; KEGG: cth:Cthe_0993 protein of unknown function DUF448. | TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; KEGG: cth:Cthe_0987 riboflavin biosynthesis protein RibF; Belongs to the ribF family. | 0.804 |
Clos_1526 | infB | Clos_1526 | Clos_1528 | PFAM: protein of unknown function DUF448; KEGG: cth:Cthe_0993 protein of unknown function DUF448. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.964 |
Clos_1526 | nusA | Clos_1526 | Clos_1525 | PFAM: protein of unknown function DUF448; KEGG: cth:Cthe_0993 protein of unknown function DUF448. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.970 |
Clos_1526 | rbfA | Clos_1526 | Clos_1529 | PFAM: protein of unknown function DUF448; KEGG: cth:Cthe_0993 protein of unknown function DUF448. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.899 |
Clos_1526 | rimP | Clos_1526 | Clos_1524 | PFAM: protein of unknown function DUF448; KEGG: cth:Cthe_0993 protein of unknown function DUF448. | Protein of unknown function DUF150; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.966 |
Clos_1526 | rpsO | Clos_1526 | Clos_1533 | PFAM: protein of unknown function DUF448; KEGG: cth:Cthe_0993 protein of unknown function DUF448. | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.712 |
Clos_1526 | rpsQ | Clos_1526 | Clos_0501 | PFAM: protein of unknown function DUF448; KEGG: cth:Cthe_0993 protein of unknown function DUF448. | Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.463 |
Clos_1526 | truB | Clos_1526 | Clos_1531 | PFAM: protein of unknown function DUF448; KEGG: cth:Cthe_0993 protein of unknown function DUF448. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.858 |
Clos_1530 | Clos_1526 | Clos_1530 | Clos_1526 | PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cth:Cthe_0989 phosphoesterase, RecJ-like protein. | PFAM: protein of unknown function DUF448; KEGG: cth:Cthe_0993 protein of unknown function DUF448. | 0.815 |
Clos_1530 | Clos_1532 | Clos_1530 | Clos_1532 | PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cth:Cthe_0989 phosphoesterase, RecJ-like protein. | TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; KEGG: cth:Cthe_0987 riboflavin biosynthesis protein RibF; Belongs to the ribF family. | 0.890 |
Clos_1530 | infB | Clos_1530 | Clos_1528 | PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cth:Cthe_0989 phosphoesterase, RecJ-like protein. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.912 |
Clos_1530 | nusA | Clos_1530 | Clos_1525 | PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cth:Cthe_0989 phosphoesterase, RecJ-like protein. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.811 |
Clos_1530 | rbfA | Clos_1530 | Clos_1529 | PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cth:Cthe_0989 phosphoesterase, RecJ-like protein. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.958 |
Clos_1530 | rimP | Clos_1530 | Clos_1524 | PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cth:Cthe_0989 phosphoesterase, RecJ-like protein. | Protein of unknown function DUF150; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.767 |
Clos_1530 | rpsO | Clos_1530 | Clos_1533 | PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cth:Cthe_0989 phosphoesterase, RecJ-like protein. | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.731 |
Clos_1530 | truB | Clos_1530 | Clos_1531 | PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cth:Cthe_0989 phosphoesterase, RecJ-like protein. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.891 |
Clos_1532 | Clos_1526 | Clos_1532 | Clos_1526 | TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; KEGG: cth:Cthe_0987 riboflavin biosynthesis protein RibF; Belongs to the ribF family. | PFAM: protein of unknown function DUF448; KEGG: cth:Cthe_0993 protein of unknown function DUF448. | 0.804 |
Clos_1532 | Clos_1530 | Clos_1532 | Clos_1530 | TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; KEGG: cth:Cthe_0987 riboflavin biosynthesis protein RibF; Belongs to the ribF family. | PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cth:Cthe_0989 phosphoesterase, RecJ-like protein. | 0.890 |
Clos_1532 | infB | Clos_1532 | Clos_1528 | TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; KEGG: cth:Cthe_0987 riboflavin biosynthesis protein RibF; Belongs to the ribF family. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.849 |