STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Clos_1616TIGRFAM: Sporulation stage III protein AG; KEGG: cdf:CD1198 stage III sporulation protein AG. (196 aa)    
Predicted Functional Partners:
Clos_1615
KEGG: cdf:CD1199 putative stage III sporulation protein AH.
 
  
 0.999
Clos_1622
TIGRFAM: Sporulation stage III protein AA; SMART: AAA ATPase; KEGG: cth:Cthe_0845 stage III sporulation protein spoIIIAA.
 
  
 0.990
Clos_1618
TIGRFAM: Sporulation stage III protein AE; KEGG: drm:Dred_1060 hypothetical protein.
 
  
 0.987
Clos_1621
TIGRFAM: Sporulation stage III protein AB; KEGG: drm:Dred_1057 stage III sporulation protein AB.
 
  
 0.985
Clos_1617
TIGRFAM: Sporulation stage III protein AF; KEGG: cth:Cthe_0840 hypothetical protein.
 
  
 0.984
Clos_1619
TIGRFAM: Sporulation stage III protein AD; KEGG: cth:Cthe_0842 stage III sporulation protein AD.
 
  
 0.978
Clos_1620
PFAM: Stage III sporulation AC family protein; KEGG: tte:TTE1285 hypothetical protein.
 
  
 0.971
Clos_1402
Sporulation stage IV protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
  
 0.857
Clos_2552
TIGRFAM: Sporulation stage III transcriptional regulator SpoIIID; KEGG: cbo:CBO0162 stage III sporulation protein D.
  
  
 0.855
Clos_1603
KEGG: tte:TTE1303 sporulation protein IVB; TIGRFAM: Peptidase S55 sporulation stage IV protein B; PFAM: peptidase S55 SpoIVB; SMART: PDZ/DHR/GLGF domain protein.
 
     0.816
Your Current Organism:
Alkaliphilus oremlandii
NCBI taxonomy Id: 350688
Other names: A. oremlandii OhILAs, Alkaliphilus oremlandii OhILAs, Alkaliphilus oremlandii str. OhILAs, Alkaliphilus oremlandii strain OhILAs, Clostridium oremlandii OhILAs, Clostridium sp. OhILAs
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