STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Clos_2012Hypothetical protein; KEGG: sth:STH879 conserved domain protein, proline-rich. (178 aa)    
Predicted Functional Partners:
Clos_1484
KEGG: ehi:388.t00006 hypothetical protein Pfam: PH DUF1090 MAP7 DUF904 DUF1410 UVR PROSITE: GLU_RICH LYS_RICH PH_DOMAIN.
  
     0.774
Clos_2781
Hypothetical protein.
  
     0.772
Clos_0589
Hypothetical protein.
  
    0.761
Clos_1372
TIGRFAM: cell division protein FtsL; KEGG: tte:TTE1652 hypothetical protein.
 
     0.761
Clos_2277
KEGG: cth:Cthe_2695 hypothetical protein.
  
     0.760
Clos_2780
KEGG: tte:TTE2685 hypothetical protein.
  
     0.754
Clos_2857
KEGG: cth:Cthe_2711 hypothetical protein.
  
     0.752
Clos_1406
KEGG: cth:Cthe_0793 hypothetical protein.
  
     0.727
Clos_2567
KEGG: cdf:CD3475 ATP synthase protein I.
  
     0.713
Clos_2481
KEGG: cth:Cthe_0760 hypothetical protein.
 
    0.711
Your Current Organism:
Alkaliphilus oremlandii
NCBI taxonomy Id: 350688
Other names: A. oremlandii OhILAs, Alkaliphilus oremlandii OhILAs, Alkaliphilus oremlandii str. OhILAs, Alkaliphilus oremlandii strain OhILAs, Clostridium oremlandii OhILAs, Clostridium sp. OhILAs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.