STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Clos_2139PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sth:STH228 putative polyferredoxin. (362 aa)    
Predicted Functional Partners:
Clos_1096
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: dsy:DSY4131 putative anaerobic dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.872
Clos_0205
Contains selenocysteine; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: dsy:DSY0547 putative anaerobic dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.816
Clos_1098
PFAM: cytoplasmic chaperone TorD family protein; KEGG: gur:Gura_0472 cytoplasmic chaperone TorD family protein.
 
   
 0.771
Clos_0277
Molybdopterin oxidoreductase; PFAM: ferredoxin; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; KEGG: amt:Amet_3096 molybdopterin oxidoreductase.
  
 
 0.749
tatC
Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.
 
     0.740
Clos_1097
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dsy:DSY4132 putative oxidoreductase iron-sulfur subunit.
 
  
 0.739
Clos_1953
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cbo:CBO1192 pyruvate-flavodoxin oxidoreductase.
  
  
 0.695
Clos_0025
PFAM: aminotransferase class I and II; KEGG: amt:Amet_0031 putative transcriptional regulator, GntR family.
    
   0.683
Clos_0769
PFAM: regulatory protein GntR HTH; KEGG: cbo:CBO0640 GntR-family transcriptional regulator.
    
   0.683
Clos_1183
PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: cth:Cthe_2689 transcriptional regulator, GntR family.
    
   0.683
Your Current Organism:
Alkaliphilus oremlandii
NCBI taxonomy Id: 350688
Other names: A. oremlandii OhILAs, Alkaliphilus oremlandii OhILAs, Alkaliphilus oremlandii str. OhILAs, Alkaliphilus oremlandii strain OhILAs, Clostridium oremlandii OhILAs, Clostridium sp. OhILAs
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.