STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Clos_2270PFAM: polysaccharide pyruvyl transferase; KEGG: cth:Cthe_2702 polysaccharide pyruvyl transferase. (359 aa)    
Predicted Functional Partners:
Clos_2269
Glycosyl transferase, WecB/TagA/CpsF family; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.
   
 0.989
Clos_2271
KEGG: tte:TTE2165 hypothetical protein.
 
    0.921
Clos_2272
KEGG: sth:STH137 hypothetical protein.
 
     0.869
Clos_0193
PFAM: S-layer domain protein; KEGG: drm:Dred_3091 Ig family protein.
  
     0.767
Clos_0194
PFAM: S-layer domain protein; KEGG: swo:Swol_1189 hypothetical protein.
  
     0.764
Clos_1885
PFAM: S-layer domain protein; KEGG: swo:Swol_1963 hypothetical protein.
 
     0.764
Clos_2628
PFAM: S-layer domain protein; KEGG: cth:Cthe_2384 S-layer-like domain containing protein.
  
     0.759
Clos_2601
PFAM: S-layer domain protein; KEGG: amt:Amet_0191 S-layer domain protein.
  
     0.757
Clos_1630
PFAM: S-layer domain protein; KEGG: cth:Cthe_2809 glycoside hydrolase, family 16.
  
     0.749
Clos_2570
PFAM: glycosyl transferase family 4; KEGG: tte:TTE0154 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase.
 
   
 0.735
Your Current Organism:
Alkaliphilus oremlandii
NCBI taxonomy Id: 350688
Other names: A. oremlandii OhILAs, Alkaliphilus oremlandii OhILAs, Alkaliphilus oremlandii str. OhILAs, Alkaliphilus oremlandii strain OhILAs, Clostridium oremlandii OhILAs, Clostridium sp. OhILAs
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