Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KQB41915.1 | KQB41916.1 | RCH33_1252 | RCH33_1253 | Assimilatory nitrate reductase (NADH) beta subunit / assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Rubredoxin. | 0.998 |
KQB41915.1 | KQB41917.1 | RCH33_1252 | RCH33_1254 | Assimilatory nitrate reductase (NADH) beta subunit / assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Thioesterase superfamily protein. | 0.498 |
KQB41916.1 | KQB41915.1 | RCH33_1253 | RCH33_1252 | Rubredoxin. | Assimilatory nitrate reductase (NADH) beta subunit / assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.998 |
KQB41916.1 | KQB41917.1 | RCH33_1253 | RCH33_1254 | Rubredoxin. | Thioesterase superfamily protein. | 0.686 |
KQB41916.1 | KQB44416.1 | RCH33_1253 | RCH33_2844 | Rubredoxin. | 3-hydroxyacyl-CoA dehydrogenase. | 0.437 |
KQB41917.1 | KQB41915.1 | RCH33_1254 | RCH33_1252 | Thioesterase superfamily protein. | Assimilatory nitrate reductase (NADH) beta subunit / assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.498 |
KQB41917.1 | KQB41916.1 | RCH33_1254 | RCH33_1253 | Thioesterase superfamily protein. | Rubredoxin. | 0.686 |
KQB41917.1 | KQB44416.1 | RCH33_1254 | RCH33_2844 | Thioesterase superfamily protein. | 3-hydroxyacyl-CoA dehydrogenase. | 0.826 |
KQB44416.1 | KQB41916.1 | RCH33_2844 | RCH33_1253 | 3-hydroxyacyl-CoA dehydrogenase. | Rubredoxin. | 0.437 |
KQB44416.1 | KQB41917.1 | RCH33_2844 | RCH33_1254 | 3-hydroxyacyl-CoA dehydrogenase. | Thioesterase superfamily protein. | 0.826 |