Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KQB36978.1 | KQB40156.1 | RCH33_2744 | RCH33_1847 | Exodeoxyribonuclease III. | Pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. | 0.650 |
KQB40153.1 | KQB40154.1 | RCH33_1844 | RCH33_1845 | NGG1p interacting factor 3 protein, NIF3; Belongs to the GTP cyclohydrolase I type 2/NIF3 family. | Zn-ribbon protein; Possibly nucleic-acid binding protein. | 0.884 |
KQB40153.1 | KQB40155.1 | RCH33_1844 | RCH33_1846 | NGG1p interacting factor 3 protein, NIF3; Belongs to the GTP cyclohydrolase I type 2/NIF3 family. | Putative hydrolase or acyltransferase (alpha/beta hydrolase superfamily). | 0.651 |
KQB40153.1 | KQB40156.1 | RCH33_1844 | RCH33_1847 | NGG1p interacting factor 3 protein, NIF3; Belongs to the GTP cyclohydrolase I type 2/NIF3 family. | Pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. | 0.414 |
KQB40154.1 | KQB40153.1 | RCH33_1845 | RCH33_1844 | Zn-ribbon protein; Possibly nucleic-acid binding protein. | NGG1p interacting factor 3 protein, NIF3; Belongs to the GTP cyclohydrolase I type 2/NIF3 family. | 0.884 |
KQB40154.1 | KQB40155.1 | RCH33_1845 | RCH33_1846 | Zn-ribbon protein; Possibly nucleic-acid binding protein. | Putative hydrolase or acyltransferase (alpha/beta hydrolase superfamily). | 0.639 |
KQB40154.1 | KQB40156.1 | RCH33_1845 | RCH33_1847 | Zn-ribbon protein; Possibly nucleic-acid binding protein. | Pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. | 0.410 |
KQB40155.1 | KQB40153.1 | RCH33_1846 | RCH33_1844 | Putative hydrolase or acyltransferase (alpha/beta hydrolase superfamily). | NGG1p interacting factor 3 protein, NIF3; Belongs to the GTP cyclohydrolase I type 2/NIF3 family. | 0.651 |
KQB40155.1 | KQB40154.1 | RCH33_1846 | RCH33_1845 | Putative hydrolase or acyltransferase (alpha/beta hydrolase superfamily). | Zn-ribbon protein; Possibly nucleic-acid binding protein. | 0.639 |
KQB40155.1 | KQB40156.1 | RCH33_1846 | RCH33_1847 | Putative hydrolase or acyltransferase (alpha/beta hydrolase superfamily). | Pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. | 0.540 |
KQB40156.1 | KQB36978.1 | RCH33_1847 | RCH33_2744 | Pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. | Exodeoxyribonuclease III. | 0.650 |
KQB40156.1 | KQB40153.1 | RCH33_1847 | RCH33_1844 | Pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. | NGG1p interacting factor 3 protein, NIF3; Belongs to the GTP cyclohydrolase I type 2/NIF3 family. | 0.414 |
KQB40156.1 | KQB40154.1 | RCH33_1847 | RCH33_1845 | Pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. | Zn-ribbon protein; Possibly nucleic-acid binding protein. | 0.410 |
KQB40156.1 | KQB40155.1 | RCH33_1847 | RCH33_1846 | Pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. | Putative hydrolase or acyltransferase (alpha/beta hydrolase superfamily). | 0.540 |
KQB40156.1 | cmk | RCH33_1847 | RCH33_1429 | Pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. | Cytidylate kinase. | 0.810 |
KQB40156.1 | der | RCH33_1847 | RCH33_2173 | Pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. | GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.649 |
cmk | KQB40156.1 | RCH33_1429 | RCH33_1847 | Cytidylate kinase. | Pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. | 0.810 |
cmk | der | RCH33_1429 | RCH33_2173 | Cytidylate kinase. | GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.982 |
der | KQB40156.1 | RCH33_2173 | RCH33_1847 | GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | Pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. | 0.649 |
der | cmk | RCH33_2173 | RCH33_1429 | GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | Cytidylate kinase. | 0.982 |