Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KQB37031.1 | KQB38113.1 | RCH33_2799 | RCH33_2458 | Glycosyl hydrolase, family 88. | Glycogen debranching enzyme. | 0.628 |
KQB37031.1 | KQB38127.1 | RCH33_2799 | RCH33_2472 | Glycosyl hydrolase, family 88. | RagB/SusD family protein. | 0.664 |
KQB37031.1 | KQB38152.1 | RCH33_2799 | RCH33_2497 | Glycosyl hydrolase, family 88. | Lipoprotein. | 0.462 |
KQB37031.1 | KQB38929.1 | RCH33_2799 | RCH33_1959 | Glycosyl hydrolase, family 88. | Alpha-L-rhamnosidase-like protein Glycoside hydrolase family 106. | 0.650 |
KQB37031.1 | KQB38936.1 | RCH33_2799 | RCH33_1966 | Glycosyl hydrolase, family 88. | Putative rhamnogalacturonan acetylesterase. | 0.523 |
KQB37031.1 | KQB38938.1 | RCH33_2799 | RCH33_1968 | Glycosyl hydrolase, family 88. | Putative rhamnogalacturonan acetylesterase. | 0.700 |
KQB38113.1 | KQB37031.1 | RCH33_2458 | RCH33_2799 | Glycogen debranching enzyme. | Glycosyl hydrolase, family 88. | 0.628 |
KQB38113.1 | KQB38127.1 | RCH33_2458 | RCH33_2472 | Glycogen debranching enzyme. | RagB/SusD family protein. | 0.763 |
KQB38113.1 | KQB38151.1 | RCH33_2458 | RCH33_2496 | Glycogen debranching enzyme. | SusC/RagA family TonB-linked outer membrane protein. | 0.715 |
KQB38113.1 | KQB38152.1 | RCH33_2458 | RCH33_2497 | Glycogen debranching enzyme. | Lipoprotein. | 0.763 |
KQB38113.1 | KQB38929.1 | RCH33_2458 | RCH33_1959 | Glycogen debranching enzyme. | Alpha-L-rhamnosidase-like protein Glycoside hydrolase family 106. | 0.695 |
KQB38113.1 | KQB38931.1 | RCH33_2458 | RCH33_1961 | Glycogen debranching enzyme. | Putative unsaturated glucuronyl hydrolase. | 0.570 |
KQB38113.1 | KQB38936.1 | RCH33_2458 | RCH33_1966 | Glycogen debranching enzyme. | Putative rhamnogalacturonan acetylesterase. | 0.763 |
KQB38113.1 | KQB38938.1 | RCH33_2458 | RCH33_1968 | Glycogen debranching enzyme. | Putative rhamnogalacturonan acetylesterase. | 0.751 |
KQB38127.1 | KQB37031.1 | RCH33_2472 | RCH33_2799 | RagB/SusD family protein. | Glycosyl hydrolase, family 88. | 0.664 |
KQB38127.1 | KQB38113.1 | RCH33_2472 | RCH33_2458 | RagB/SusD family protein. | Glycogen debranching enzyme. | 0.763 |
KQB38127.1 | KQB38151.1 | RCH33_2472 | RCH33_2496 | RagB/SusD family protein. | SusC/RagA family TonB-linked outer membrane protein. | 0.796 |
KQB38127.1 | KQB38152.1 | RCH33_2472 | RCH33_2497 | RagB/SusD family protein. | Lipoprotein. | 0.739 |
KQB38127.1 | KQB38929.1 | RCH33_2472 | RCH33_1959 | RagB/SusD family protein. | Alpha-L-rhamnosidase-like protein Glycoside hydrolase family 106. | 0.668 |
KQB38127.1 | KQB38931.1 | RCH33_2472 | RCH33_1961 | RagB/SusD family protein. | Putative unsaturated glucuronyl hydrolase. | 0.488 |
page 1 of 4