Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KQB39089.1 | KQB39090.1 | RCH33_2125 | RCH33_2126 | PfkB domain protein. | Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase. | 0.997 |
KQB39089.1 | KQB39091.1 | RCH33_2125 | RCH33_2127 | PfkB domain protein. | Tagaturonate reductase. | 0.827 |
KQB39089.1 | uxaC | RCH33_2125 | RCH33_2124 | PfkB domain protein. | Uronate isomerase. | 0.850 |
KQB39090.1 | KQB39089.1 | RCH33_2126 | RCH33_2125 | Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase. | PfkB domain protein. | 0.997 |
KQB39090.1 | KQB39091.1 | RCH33_2126 | RCH33_2127 | Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase. | Tagaturonate reductase. | 0.826 |
KQB39090.1 | KQB40149.1 | RCH33_2126 | RCH33_1840 | Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase. | NAD-dependent glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.811 |
KQB39090.1 | KQB41963.1 | RCH33_2126 | RCH33_1300 | Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase. | Glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.811 |
KQB39090.1 | RCH33_517 | RCH33_2126 | RCH33_517 | Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.837 |
KQB39090.1 | RCH33_64 | RCH33_2126 | RCH33_64 | Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase. | NAD-dependent aldehyde dehydrogenase. | 0.902 |
KQB39090.1 | eno | RCH33_2126 | RCH33_3146 | Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.821 |
KQB39090.1 | pgi | RCH33_2126 | RCH33_510 | Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.838 |
KQB39090.1 | tpiA | RCH33_2126 | RCH33_1189 | Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.821 |
KQB39090.1 | uxaC | RCH33_2126 | RCH33_2124 | Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase. | Uronate isomerase. | 0.884 |
KQB39091.1 | KQB39089.1 | RCH33_2127 | RCH33_2125 | Tagaturonate reductase. | PfkB domain protein. | 0.827 |
KQB39091.1 | KQB39090.1 | RCH33_2127 | RCH33_2126 | Tagaturonate reductase. | Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase. | 0.826 |
KQB39091.1 | pgi | RCH33_2127 | RCH33_510 | Tagaturonate reductase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.557 |
KQB39091.1 | uxaC | RCH33_2127 | RCH33_2124 | Tagaturonate reductase. | Uronate isomerase. | 0.995 |
KQB40149.1 | KQB39090.1 | RCH33_1840 | RCH33_2126 | NAD-dependent glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase. | 0.811 |
KQB40149.1 | KQB41963.1 | RCH33_1840 | RCH33_1300 | NAD-dependent glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.905 |
KQB40149.1 | RCH33_517 | RCH33_1840 | RCH33_517 | NAD-dependent glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.885 |
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