Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KQB37913.1 | KQB37914.1 | RCH33_2256 | RCH33_2257 | Dolichol-phosphate mannosyltransferase. | Dihydroorotase. | 0.823 |
KQB37913.1 | KQB37915.1 | RCH33_2256 | RCH33_2258 | Dolichol-phosphate mannosyltransferase. | Putative lipoprotein. | 0.823 |
KQB37914.1 | KQB37913.1 | RCH33_2257 | RCH33_2256 | Dihydroorotase. | Dolichol-phosphate mannosyltransferase. | 0.823 |
KQB37914.1 | KQB37915.1 | RCH33_2257 | RCH33_2258 | Dihydroorotase. | Putative lipoprotein. | 0.835 |
KQB37914.1 | KQB44261.1 | RCH33_2257 | RCH33_3016 | Dihydroorotase. | Carbamoyl phosphate synthase large subunit. | 0.981 |
KQB37914.1 | KQB44302.1 | RCH33_2257 | RCH33_2930 | Dihydroorotase. | Dihydroorotase. | 0.920 |
KQB37914.1 | KQB44307.1 | RCH33_2257 | RCH33_2935 | Dihydroorotase. | Phosphoribosyltransferase. | 0.781 |
KQB37914.1 | RCH33_135 | RCH33_2257 | RCH33_135 | Dihydroorotase. | Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase. | 0.781 |
KQB37914.1 | carA | RCH33_2257 | RCH33_3145 | Dihydroorotase. | Carbamoyl-phosphate synthase small chain; Belongs to the CarA family. | 0.979 |
KQB37914.1 | pyrB | RCH33_2257 | RCH33_134 | Dihydroorotase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
KQB37914.1 | pyrD | RCH33_2257 | RCH33_1874 | Dihydroorotase. | Dihydroorotate dehydrogenase (quinone); Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.986 |
KQB37914.1 | pyrE | RCH33_2257 | RCH33_30 | Dihydroorotase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.849 |
KQB37915.1 | KQB37913.1 | RCH33_2258 | RCH33_2256 | Putative lipoprotein. | Dolichol-phosphate mannosyltransferase. | 0.823 |
KQB37915.1 | KQB37914.1 | RCH33_2258 | RCH33_2257 | Putative lipoprotein. | Dihydroorotase. | 0.835 |
KQB44261.1 | KQB37914.1 | RCH33_3016 | RCH33_2257 | Carbamoyl phosphate synthase large subunit. | Dihydroorotase. | 0.981 |
KQB44261.1 | KQB44302.1 | RCH33_3016 | RCH33_2930 | Carbamoyl phosphate synthase large subunit. | Dihydroorotase. | 0.870 |
KQB44261.1 | KQB44307.1 | RCH33_3016 | RCH33_2935 | Carbamoyl phosphate synthase large subunit. | Phosphoribosyltransferase. | 0.781 |
KQB44261.1 | RCH33_135 | RCH33_3016 | RCH33_135 | Carbamoyl phosphate synthase large subunit. | Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase. | 0.773 |
KQB44261.1 | carA | RCH33_3016 | RCH33_3145 | Carbamoyl phosphate synthase large subunit. | Carbamoyl-phosphate synthase small chain; Belongs to the CarA family. | 0.999 |
KQB44261.1 | pyrB | RCH33_3016 | RCH33_134 | Carbamoyl phosphate synthase large subunit. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
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