Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KQB38155.1 | KQB38156.1 | RCH33_2501 | RCH33_2502 | Putative outer membrane protein. | Putative lipoprotein. | 0.749 |
KQB38155.1 | KQB38157.1 | RCH33_2501 | RCH33_2503 | Putative outer membrane protein. | Hypothetical protein. | 0.738 |
KQB38155.1 | KQB38158.1 | RCH33_2501 | RCH33_2504 | Putative outer membrane protein. | Hemolysin-like protein. | 0.603 |
KQB38155.1 | coaX | RCH33_2501 | RCH33_2500 | Putative outer membrane protein. | Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | 0.801 |
KQB38156.1 | KQB38155.1 | RCH33_2502 | RCH33_2501 | Putative lipoprotein. | Putative outer membrane protein. | 0.749 |
KQB38156.1 | KQB38157.1 | RCH33_2502 | RCH33_2503 | Putative lipoprotein. | Hypothetical protein. | 0.753 |
KQB38156.1 | KQB38158.1 | RCH33_2502 | RCH33_2504 | Putative lipoprotein. | Hemolysin-like protein. | 0.722 |
KQB38156.1 | coaX | RCH33_2502 | RCH33_2500 | Putative lipoprotein. | Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | 0.688 |
KQB38157.1 | KQB38155.1 | RCH33_2503 | RCH33_2501 | Hypothetical protein. | Putative outer membrane protein. | 0.738 |
KQB38157.1 | KQB38156.1 | RCH33_2503 | RCH33_2502 | Hypothetical protein. | Putative lipoprotein. | 0.753 |
KQB38157.1 | KQB38158.1 | RCH33_2503 | RCH33_2504 | Hypothetical protein. | Hemolysin-like protein. | 0.779 |
KQB38157.1 | coaX | RCH33_2503 | RCH33_2500 | Hypothetical protein. | Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | 0.700 |
KQB38158.1 | KQB38155.1 | RCH33_2504 | RCH33_2501 | Hemolysin-like protein. | Putative outer membrane protein. | 0.603 |
KQB38158.1 | KQB38156.1 | RCH33_2504 | RCH33_2502 | Hemolysin-like protein. | Putative lipoprotein. | 0.722 |
KQB38158.1 | KQB38157.1 | RCH33_2504 | RCH33_2503 | Hemolysin-like protein. | Hypothetical protein. | 0.779 |
KQB38158.1 | coaX | RCH33_2504 | RCH33_2500 | Hemolysin-like protein. | Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | 0.608 |
KQB38172.1 | coaX | RCH33_2518 | RCH33_2500 | Penicillin-binding protein 2 (PBP-2). | Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | 0.485 |
KQB41826.1 | cmk | RCH33_1163 | RCH33_1429 | Phosphopantothenoylcysteine decarboxylase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | Cytidylate kinase. | 0.557 |
KQB41826.1 | coaD | RCH33_1163 | RCH33_34 | Phosphopantothenoylcysteine decarboxylase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.966 |
KQB41826.1 | coaX | RCH33_1163 | RCH33_2500 | Phosphopantothenoylcysteine decarboxylase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | 0.962 |
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