Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KQB38166.1 | KQB38167.1 | RCH33_2512 | RCH33_2513 | NLP/P60 protein. | Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.834 |
KQB38166.1 | KQB38169.1 | RCH33_2512 | RCH33_2515 | NLP/P60 protein. | Putative periplasmic tail-specific proteinase; Belongs to the peptidase S41A family. | 0.481 |
KQB38166.1 | surE | RCH33_2512 | RCH33_2514 | NLP/P60 protein. | 5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.731 |
KQB38167.1 | KQB38166.1 | RCH33_2513 | RCH33_2512 | Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | NLP/P60 protein. | 0.834 |
KQB38167.1 | KQB38169.1 | RCH33_2513 | RCH33_2515 | Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | Putative periplasmic tail-specific proteinase; Belongs to the peptidase S41A family. | 0.562 |
KQB38167.1 | surE | RCH33_2513 | RCH33_2514 | Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.750 |
KQB38169.1 | KQB38166.1 | RCH33_2515 | RCH33_2512 | Putative periplasmic tail-specific proteinase; Belongs to the peptidase S41A family. | NLP/P60 protein. | 0.481 |
KQB38169.1 | KQB38167.1 | RCH33_2515 | RCH33_2513 | Putative periplasmic tail-specific proteinase; Belongs to the peptidase S41A family. | Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.562 |
KQB38169.1 | KQB38170.1 | RCH33_2515 | RCH33_2516 | Putative periplasmic tail-specific proteinase; Belongs to the peptidase S41A family. | DNA/RNA non-specific endonuclease. | 0.615 |
KQB38169.1 | surE | RCH33_2515 | RCH33_2514 | Putative periplasmic tail-specific proteinase; Belongs to the peptidase S41A family. | 5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.636 |
KQB38170.1 | KQB38169.1 | RCH33_2516 | RCH33_2515 | DNA/RNA non-specific endonuclease. | Putative periplasmic tail-specific proteinase; Belongs to the peptidase S41A family. | 0.615 |
surE | KQB38166.1 | RCH33_2514 | RCH33_2512 | 5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | NLP/P60 protein. | 0.731 |
surE | KQB38167.1 | RCH33_2514 | RCH33_2513 | 5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.750 |
surE | KQB38169.1 | RCH33_2514 | RCH33_2515 | 5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | Putative periplasmic tail-specific proteinase; Belongs to the peptidase S41A family. | 0.636 |