Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KQB36920.1 | KQB44434.1 | RCH33_2686 | RCH33_2862 | Putative lipoprotein. | Putative penicillin-binding protein. | 0.416 |
KQB36920.1 | RCH33_748 | RCH33_2686 | RCH33_748 | Putative lipoprotein. | Putative lipoprotein. | 0.741 |
KQB36920.1 | RCH33_918 | RCH33_2686 | RCH33_918 | Putative lipoprotein. | Hypothetical protein. | 0.721 |
KQB37026.1 | KQB38954.1 | RCH33_2793 | RCH33_1984 | Propanediol utilization protein. | C-type lectin domain-containing protein. | 0.456 |
KQB37026.1 | KQB44434.1 | RCH33_2793 | RCH33_2862 | Propanediol utilization protein. | Putative penicillin-binding protein. | 0.550 |
KQB37026.1 | guaA | RCH33_2793 | RCH33_105 | Propanediol utilization protein. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.785 |
KQB38954.1 | KQB37026.1 | RCH33_1984 | RCH33_2793 | C-type lectin domain-containing protein. | Propanediol utilization protein. | 0.456 |
KQB38954.1 | KQB44434.1 | RCH33_1984 | RCH33_2862 | C-type lectin domain-containing protein. | Putative penicillin-binding protein. | 0.461 |
KQB38954.1 | RCH33_748 | RCH33_1984 | RCH33_748 | C-type lectin domain-containing protein. | Putative lipoprotein. | 0.407 |
KQB38954.1 | RCH33_918 | RCH33_1984 | RCH33_918 | C-type lectin domain-containing protein. | Hypothetical protein. | 0.455 |
KQB41799.1 | KQB44434.1 | RCH33_1136 | RCH33_2862 | Hypothetical protein. | Putative penicillin-binding protein. | 0.409 |
KQB41799.1 | RCH33_918 | RCH33_1136 | RCH33_918 | Hypothetical protein. | Hypothetical protein. | 0.457 |
KQB44412.1 | KQB44434.1 | RCH33_2840 | RCH33_2862 | Hypothetical protein. | Putative penicillin-binding protein. | 0.549 |
KQB44434.1 | KQB36920.1 | RCH33_2862 | RCH33_2686 | Putative penicillin-binding protein. | Putative lipoprotein. | 0.416 |
KQB44434.1 | KQB37026.1 | RCH33_2862 | RCH33_2793 | Putative penicillin-binding protein. | Propanediol utilization protein. | 0.550 |
KQB44434.1 | KQB38954.1 | RCH33_2862 | RCH33_1984 | Putative penicillin-binding protein. | C-type lectin domain-containing protein. | 0.461 |
KQB44434.1 | KQB41799.1 | RCH33_2862 | RCH33_1136 | Putative penicillin-binding protein. | Hypothetical protein. | 0.409 |
KQB44434.1 | KQB44412.1 | RCH33_2862 | RCH33_2840 | Putative penicillin-binding protein. | Hypothetical protein. | 0.549 |
KQB44434.1 | RCH33_748 | RCH33_2862 | RCH33_748 | Putative penicillin-binding protein. | Putative lipoprotein. | 0.485 |
KQB44434.1 | RCH33_918 | RCH33_2862 | RCH33_918 | Putative penicillin-binding protein. | Hypothetical protein. | 0.557 |
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