STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQB44305.1FKBP-type peptidyl-prolyl cis-trans isomerase FkpA. (327 aa)    
Predicted Functional Partners:
RCH33_133
Ribonuclease Z.
  
     0.736
KQB40171.1
Heat shock protein Hsp90.
   
 0.734
KQB44386.1
Phenol MetA deg domain containing protein.
  
     0.730
KQB37008.1
Putative lipoprotein.
  
     0.729
RCH33_704
Putative lipoprotein.
  
     0.729
RCH33_781
Hypothetical protein.
  
     0.718
KQB41965.1
DUF490 domain containing protein.
 
     0.710
KQB42933.1
Hypothetical protein.
  
     0.705
KQB38058.1
Hypothetical protein.
  
     0.693
KQB40129.1
DUF4252 domain containing protein.
  
     0.690
Your Current Organism:
Flavobacterium daejeonense
NCBI taxonomy Id: 350893
Other names: DSM 17708, F. daejeonense, Flavobacterium daejeonense Kim et al. 2006, Flavobacterium sp. GH1-10, Flavobacterium sp. LB-W, KACC 11422, strain GH1-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.