Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KQB44340.1Putative xylanase Glycoside hydrolase family 8. (411 aa)    
Predicted Functional Partners:
KQB44339.1
Enterochelin esterase.
 
     0.863
KQB44341.1
Glycoside hydrolase; Belongs to the glycosyl hydrolase 43 family.
 
     0.859
KQB44338.1
Putative carbohydrate-active enzyme.
 
     0.848
KQB44346.1
DUF303 domain containing protein.
 
     0.758
KQB44337.1
Enterochelin esterase.
 
     0.755
RCH33_224
DUF303 domain containing protein.
  
     0.680
KQB44336.1
Glycosyl hydrolase; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.627
KQB44333.1
Glycoside hydrolase; Belongs to the glycosyl hydrolase 43 family.
     0.623
KQB44335.1
Glycoside hydrolase.
 
     0.579
KQB44342.1
Glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 43 family.
    
 0.534
Your Current Organism:
Flavobacterium daejeonense
NCBI taxonomy Id: 350893
Other names: DSM 17708, F. daejeonense, Flavobacterium daejeonense Kim et al. 2006, Flavobacterium sp. GH1-10, Flavobacterium sp. LB-W, KACC 11422, strain GH1-10
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