STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQB44037.1Secreted hyalin domain protein; Likely involved in carbohydrate binding or cell-adhesion. (2024 aa)    
Predicted Functional Partners:
KQB41437.1
O-Antigen ligase.
  
     0.730
RCH33_721
Glutamate dehydrogenase.
  
     0.721
KQB38052.1
RemB protein.
  
     0.719
KQB39038.1
Exosortase family protein XrtF.
  
     0.682
KQB44176.1
Polysaccharide export outer membrane protein.
  
     0.655
RCH33_866
Coenzyme F390 synthetase-like protein.
  
     0.652
KQB44063.1
N-acetylglucosaminyltransferase.
  
  
  0.643
KQB36839.1
OMP b-brl 2 domain containing protein.
  
     0.639
KQB39039.1
Exosortase F-associated protein.
  
     0.633
RCH33_841
TPR-domain containing protein.
  
 
   0.615
Your Current Organism:
Flavobacterium daejeonense
NCBI taxonomy Id: 350893
Other names: DSM 17708, F. daejeonense, Flavobacterium daejeonense Kim et al. 2006, Flavobacterium sp. GH1-10, Flavobacterium sp. LB-W, KACC 11422, strain GH1-10
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