STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQB44038.1Hypothetical protein. (150 aa)    
Predicted Functional Partners:
KQB36986.1
DUF4286 domain containing protein.
  
     0.603
KQB44039.1
Tic20 domain containing protein.
 
     0.584
RCH33_857
Ferredoxin.
 
 
  0.550
KQB44041.1
Phage shock protein PspC.
 
     0.506
KQB42148.1
Nitric oxide dioxygenase.
  
 
  0.488
RCH33_133
Ribonuclease Z.
  
     0.465
KQB41949.1
Hypothetical protein.
  
     0.460
KQB38058.1
Hypothetical protein.
  
     0.459
KQB41427.1
Hypothetical protein.
  
     0.444
KQB44465.1
Hypothetical protein.
  
     0.439
Your Current Organism:
Flavobacterium daejeonense
NCBI taxonomy Id: 350893
Other names: DSM 17708, F. daejeonense, Flavobacterium daejeonense Kim et al. 2006, Flavobacterium sp. GH1-10, Flavobacterium sp. LB-W, KACC 11422, strain GH1-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.