STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQB44059.1Thioredoxin family protein. (129 aa)    
Predicted Functional Partners:
groL
60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
  
 
 0.840
RCH33_703
Signal transduction histidine kinase.
  
 0.830
KQB42002.1
Putative lipoprotein.
  
 
 0.826
KQB42003.1
Glycoside hydrolase xylanase domain protein.
  
 
 0.826
RCH33_23
Arsenate reductase.
  
 
 0.826
RCH33_259
Glycoside hydrolase xylanase domain protein.
  
 
 0.826
RCH33_648
Low molecular weight protein tyrosine phosphatase.
  
 
 0.826
rplC
50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.
  
   0.791
KQB37946.1
Thioredoxin reductase.
  
 0.752
KQB38211.1
Ferredoxin-NADP reductase.
  
 0.752
Your Current Organism:
Flavobacterium daejeonense
NCBI taxonomy Id: 350893
Other names: DSM 17708, F. daejeonense, Flavobacterium daejeonense Kim et al. 2006, Flavobacterium sp. GH1-10, Flavobacterium sp. LB-W, KACC 11422, strain GH1-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.