Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KQB37986.1 | KQB38052.1 | RCH33_2329 | RCH33_2397 | Geranylgeranylglyceryl phosphate synthase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). | RemB protein. | 0.729 |
KQB37986.1 | KQB41437.1 | RCH33_2329 | RCH33_1609 | Geranylgeranylglyceryl phosphate synthase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). | O-Antigen ligase. | 0.626 |
KQB37986.1 | KQB42935.1 | RCH33_2329 | RCH33_1034 | Geranylgeranylglyceryl phosphate synthase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). | Hypothetical protein. | 0.547 |
KQB37986.1 | KQB44063.1 | RCH33_2329 | RCH33_3233 | Geranylgeranylglyceryl phosphate synthase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). | N-acetylglucosaminyltransferase. | 0.738 |
KQB37986.1 | KQB44176.1 | RCH33_2329 | RCH33_3152 | Geranylgeranylglyceryl phosphate synthase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). | Polysaccharide export outer membrane protein. | 0.497 |
KQB37986.1 | KQB44177.1 | RCH33_2329 | RCH33_3153 | Geranylgeranylglyceryl phosphate synthase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). | Capsular exopolysaccharide biosynthesis protein. | 0.460 |
KQB37986.1 | RCH33_304 | RCH33_2329 | RCH33_304 | Geranylgeranylglyceryl phosphate synthase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). | Putative O-methyltransferase. | 0.721 |
KQB37986.1 | RCH33_461 | RCH33_2329 | RCH33_461 | Geranylgeranylglyceryl phosphate synthase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). | UbiA prenyltransferase. | 0.979 |
KQB37986.1 | RCH33_721 | RCH33_2329 | RCH33_721 | Geranylgeranylglyceryl phosphate synthase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). | Glutamate dehydrogenase. | 0.598 |
KQB38052.1 | KQB37986.1 | RCH33_2397 | RCH33_2329 | RemB protein. | Geranylgeranylglyceryl phosphate synthase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). | 0.729 |
KQB38052.1 | KQB41437.1 | RCH33_2397 | RCH33_1609 | RemB protein. | O-Antigen ligase. | 0.772 |
KQB38052.1 | KQB42935.1 | RCH33_2397 | RCH33_1034 | RemB protein. | Hypothetical protein. | 0.728 |
KQB38052.1 | KQB44063.1 | RCH33_2397 | RCH33_3233 | RemB protein. | N-acetylglucosaminyltransferase. | 0.762 |
KQB38052.1 | KQB44176.1 | RCH33_2397 | RCH33_3152 | RemB protein. | Polysaccharide export outer membrane protein. | 0.771 |
KQB38052.1 | KQB44177.1 | RCH33_2397 | RCH33_3153 | RemB protein. | Capsular exopolysaccharide biosynthesis protein. | 0.755 |
KQB38052.1 | RCH33_304 | RCH33_2397 | RCH33_304 | RemB protein. | Putative O-methyltransferase. | 0.762 |
KQB38052.1 | RCH33_461 | RCH33_2397 | RCH33_461 | RemB protein. | UbiA prenyltransferase. | 0.734 |
KQB38052.1 | RCH33_721 | RCH33_2397 | RCH33_721 | RemB protein. | Glutamate dehydrogenase. | 0.774 |
KQB41437.1 | KQB37986.1 | RCH33_1609 | RCH33_2329 | O-Antigen ligase. | Geranylgeranylglyceryl phosphate synthase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). | 0.626 |
KQB41437.1 | KQB38052.1 | RCH33_1609 | RCH33_2397 | O-Antigen ligase. | RemB protein. | 0.772 |
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