STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCH33_586Por secretion system C-terminal sorting domain-containing protein; Belongs to the glycosyl hydrolase 13 family. (1110 aa)    
Predicted Functional Partners:
RCH33_588
Putative glycoside hydrolase, family 13; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.970
KQB38143.1
Alpha amylase catalytic subunit; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.879
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 
 0.875
KQB40778.1
Glucose-1-phosphate adenylyltransferase; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
 
 
 0.870
RCH33_584
RagB/SusD domain protein.
 
     0.855
KQB37007.1
Glycogen synthase.
  
 
 0.840
RCH33_585
Starch utilization lipoprotein.
 
     0.804
RCH33_583
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.784
RCH33_587
PQQ enzyme repeat-containing protein.
       0.773
RCH33_248
Putative alpha-glucosidase Glycoside hydrolase family 97.
  
  
  0.628
Your Current Organism:
Flavobacterium daejeonense
NCBI taxonomy Id: 350893
Other names: DSM 17708, F. daejeonense, Flavobacterium daejeonense Kim et al. 2006, Flavobacterium sp. GH1-10, Flavobacterium sp. LB-W, KACC 11422, strain GH1-10
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