Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KQB36845.1 | RCH33_705 | RCH33_2611 | RCH33_705 | Outer membrane chaperone Skp (OmpH). | Peptidase M61. | 0.483 |
KQB36909.1 | RCH33_705 | RCH33_2675 | RCH33_705 | Putative adhesin SprC. | Peptidase M61. | 0.407 |
KQB44301.1 | RCH33_705 | RCH33_2929 | RCH33_705 | Membrane protein. | Peptidase M61. | 0.411 |
RCH33_652 | RCH33_705 | RCH33_652 | RCH33_705 | Haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED. | Peptidase M61. | 0.427 |
RCH33_704 | RCH33_705 | RCH33_704 | RCH33_705 | Putative lipoprotein. | Peptidase M61. | 0.542 |
RCH33_705 | KQB36845.1 | RCH33_705 | RCH33_2611 | Peptidase M61. | Outer membrane chaperone Skp (OmpH). | 0.483 |
RCH33_705 | KQB36909.1 | RCH33_705 | RCH33_2675 | Peptidase M61. | Putative adhesin SprC. | 0.407 |
RCH33_705 | KQB44301.1 | RCH33_705 | RCH33_2929 | Peptidase M61. | Membrane protein. | 0.411 |
RCH33_705 | RCH33_652 | RCH33_705 | RCH33_652 | Peptidase M61. | Haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED. | 0.427 |
RCH33_705 | RCH33_704 | RCH33_705 | RCH33_704 | Peptidase M61. | Putative lipoprotein. | 0.542 |
RCH33_705 | RCH33_706 | RCH33_705 | RCH33_706 | Peptidase M61. | DUF2805 domain containing protein. | 0.535 |
RCH33_706 | RCH33_705 | RCH33_706 | RCH33_705 | DUF2805 domain containing protein. | Peptidase M61. | 0.535 |