STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM72964.1Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. (321 aa)    
Predicted Functional Partners:
EDM72962.1
COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog.
       0.801
EDM72963.1
HAD-superfamily hydrolase subfamily IA, variant 3; COG1011 Predicted hydrolase (HAD superfamily).
       0.798
EDM72961.1
Alpha/beta hydrolase, putative; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
       0.785
EDM72965.1
YaiI/YqxD family protein, putative; COG1671 Uncharacterized protein conserved in bacteria; Belongs to the UPF0178 family.
       0.494
EDM72967.1
S-formylglutathione hydrolase, putative; Serine hydrolase involved in the detoxification of formaldehyde.
       0.480
EDM70420.1
Putative ABC transporter, inner membrane subunit; COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters.
  
 
  0.479
EDM72966.1
Soluble pyridine nucleotide transhydrogenase; COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes.
       0.478
Your Current Organism:
Roseobacter sp. AzwK3b
NCBI taxonomy Id: 351016
Other names: R. sp. AzwK-3b, Roseobacter sp. AzwK-3b
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