STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM72250.1Hypothetical protein. (186 aa)    
Predicted Functional Partners:
EDM72248.1
Hypothetical protein.
 
    0.983
EDM72249.1
COG4733 Phage-related protein, tail component.
 
     0.953
EDM72252.1
Tape measure domain.
 
     0.897
EDM72244.1
Hypothetical protein.
 
     0.823
EDM72239.1
Prophage MuMc02, head decoration protein, putative.
 
    0.816
EDM72254.1
Hypothetical protein.
 
     0.795
EDM72251.1
Hypothetical protein; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
       0.782
EDM72253.1
Hypothetical protein.
       0.782
EDM72255.1
Hypothetical protein.
 
     0.745
EDM72263.1
Hypothetical protein; COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
 
    0.727
Your Current Organism:
Roseobacter sp. AzwK3b
NCBI taxonomy Id: 351016
Other names: R. sp. AzwK-3b, Roseobacter sp. AzwK-3b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.