STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM72280.1Integrase, catalytic region. (122 aa)    
Predicted Functional Partners:
EDM73074.1
Integrase, catalytic region; COG2801 Transposase and inactivated derivatives.
 
     0.937
EDM71269.1
Integrase, catalytic region; COG2801 Transposase and inactivated derivatives.
 
     0.937
EDM69516.1
Integrase, catalytic region; COG2801 Transposase and inactivated derivatives.
 
     0.936
EDM71913.1
Integrase, catalytic region; COG2801 Transposase and inactivated derivatives.
 
     0.936
EDM69949.1
Probable insertion sequence transposase protein.
 
    0.741
EDM73075.1
COG2801 Transposase and inactivated derivatives.
 
    0.740
EDM69517.1
COG2801 Transposase and inactivated derivatives.
 
    0.740
EDM71268.1
COG2801 Transposase and inactivated derivatives.
 
    0.740
EDM71914.1
Transposase.
 
    0.740
EDM72278.1
Integrase, catalytic region; COG2801 Transposase and inactivated derivatives.
 
     0.663
Your Current Organism:
Roseobacter sp. AzwK3b
NCBI taxonomy Id: 351016
Other names: R. sp. AzwK-3b, Roseobacter sp. AzwK-3b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.