STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM72364.1Hypothetical protein. (178 aa)    
Predicted Functional Partners:
pyrB-2
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
       0.877
EDM72366.1
Dihydroorotase, multifunctional complex type; COG0044 Dihydroorotase and related cyclic amidohydrolases.
       0.876
plsY
Hypothetical protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
       0.875
EDM72365.1
Hypothetical protein; COG0540 Aspartate carbamoyltransferase, catalytic chain.
       0.811
EDM72362.1
Cytosine deaminase; COG1573 Uracil-DNA glycosylase.
       0.642
EDM72359.1
Molybdenum cofactor biosynthesis protein B; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.
       0.639
EDM72369.1
Hypothetical protein; COG3572 Gamma-glutamylcysteine synthetase.
  
     0.589
EDM72361.1
Ser/Thr protein phosphatase family protein; COG2129 Predicted phosphoesterases, related to the Icc protein.
       0.557
EDM72360.1
Transmembrane amino acid efflux protein; COG1280 Putative threonine efflux protein.
       0.540
EDM71958.1
Hypothetical protein; COG0703 Shikimate kinase.
  
     0.535
Your Current Organism:
Roseobacter sp. AzwK3b
NCBI taxonomy Id: 351016
Other names: R. sp. AzwK-3b, Roseobacter sp. AzwK-3b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.