STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM72458.1Hypothetical protein; COG1250 3-hydroxyacyl-CoA dehydrogenase. (290 aa)    
Predicted Functional Partners:
EDM69886.1
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
   
 0.853
EDM73322.1
Hypothetical protein; Belongs to the mannose-6-phosphate isomerase type 2 family.
   
 0.853
EDM72605.1
KpsF/GutQ family protein; COG0794 Predicted sugar phosphate isomerase involved in capsule formation; Belongs to the SIS family. GutQ/KpsF subfamily.
   
 
 0.841
EDM71374.1
Transketolase; Belongs to the transketolase family.
  
 
 0.786
EDM70375.1
ATPase, putative; COG4963 Flp pilus assembly protein, ATPase CpaE.
  
    0.757
EDM72457.1
3-hydroxybutyryl-CoA dehydrogenase.
  
    0.742
EDM69664.1
Hypothetical protein; COG3588 Fructose-1,6-bisphosphate aldolase.
  
 0.683
tal
Fructose-6-phosphate aldolase 2; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
 
 0.675
EDM72600.1
COG0036 Pentose-5-phosphate-3-epimerase.
  
 
 0.675
EDM71463.1
Tellurite resistance protein; COG0477 Permeases of the major facilitator superfamily.
  
     0.668
Your Current Organism:
Roseobacter sp. AzwK3b
NCBI taxonomy Id: 351016
Other names: R. sp. AzwK-3b, Roseobacter sp. AzwK-3b
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.