STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM69855.1Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (251 aa)    
Predicted Functional Partners:
EDM70445.1
Sulfatase; COG3119 Arylsulfatase A and related enzymes.
   
 0.828
EDM69857.1
COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
     0.819
EDM69856.1
Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
    
0.815
EDM69859.1
Spermidine/putrescine ABC transporter, ATP-binding protein; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
     0.800
EDM71101.1
Putative serine/threonine-specific protein phosphatase protein; COG0420 DNA repair exonuclease.
    
  0.781
EDM71790.1
COG0633 Ferredoxin.
   
 0.781
EDM69858.1
ABC spermidine/putrescine transporter, inner membrane subunit; COG1176 ABC-type spermidine/putrescine transport system, permease component I.
       0.773
EDM69854.1
ABC transporter, substrate binding protein (spermidine/putrescine); COG0687 Spermidine/putrescine-binding periplasmic protein.
 
     0.769
EDM70234.1
COG2365 Protein tyrosine/serine phosphatase.
    
  0.769
EDM72793.1
Cytochrome b/b6-like protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
  0.764
Your Current Organism:
Roseobacter sp. AzwK3b
NCBI taxonomy Id: 351016
Other names: R. sp. AzwK-3b, Roseobacter sp. AzwK-3b
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.