STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM70709.1Two-component response regulator, putative; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (299 aa)    
Predicted Functional Partners:
EDM73207.1
Signal transduction histidine kinase.
 0.998
EDM70708.1
Two-component hybrid sensor and regulator, putative; COG0642 Signal transduction histidine kinase.
 
0.949
EDM72524.1
Multi-sensor hybrid histidine kinase.
0.947
EDM73464.1
Sensory box histidine kinase/response regulator; COG2203 FOG: GAF domain.
  
 0.933
EDM70726.1
PAS/PAC sensor hybrid histidine kinase; COG2202 FOG: PAS/PAC domain.
 
 0.929
EDM72830.1
Hypothetical protein.
  
 0.907
EDM72844.1
ATP-binding region, ATPase-like protein; COG0784 FOG: CheY-like receiver.
 
 
 0.897
EDM70707.1
ABC transporter, substrate-binding protein, putative; COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
 
  
  0.864
EDM70737.1
Sensory box histidine kinase/response regulator; COG0642 Signal transduction histidine kinase.
 
 0.864
EDM72918.1
COG0642 Signal transduction histidine kinase.
 0.845
Your Current Organism:
Roseobacter sp. AzwK3b
NCBI taxonomy Id: 351016
Other names: R. sp. AzwK-3b, Roseobacter sp. AzwK-3b
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