STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM71964.1FAD dependent oxidoreductase; COG0665 Glycine/D-amino acid oxidases (deaminating); Belongs to the GcvT family. (809 aa)    
Predicted Functional Partners:
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 0.997
EDM72955.1
COG4311 Sarcosine oxidase delta subunit.
 
 0.989
EDM72051.1
Sarcosine oxidase, delta subunit, heterotetrameric; COG4311 Sarcosine oxidase delta subunit.
 
 0.989
EDM72954.1
Sarcosine oxidase, alpha subunit family protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the GcvT family.
 
0.983
EDM72050.1
Sarcosine oxidase, alpha subunit family protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the GcvT family.
 
0.983
EDM72953.1
COG4583 Sarcosine oxidase gamma subunit.
 
 0.982
EDM72049.1
COG4583 Sarcosine oxidase gamma subunit.
 
 0.980
EDM73215.1
COG0067 Glutamate synthase domain 1.
  
 
 0.955
EDM70615.1
FAD dependent oxidoreductase/aminomethyl transferase; COG0665 Glycine/D-amino acid oxidases (deaminating); Belongs to the GcvT family.
 
0.955
EDM72163.1
Dimethylglycine dehydrogenase, putative; COG0665 Glycine/D-amino acid oxidases (deaminating); Belongs to the GcvT family.
 
0.954
Your Current Organism:
Roseobacter sp. AzwK3b
NCBI taxonomy Id: 351016
Other names: R. sp. AzwK-3b, Roseobacter sp. AzwK-3b
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