STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM72153.1Inner-membrane translocator; COG4603 ABC-type uncharacterized transport system, permease component. (67 aa)    
Predicted Functional Partners:
EDM72154.1
Sugar ABC transporter, permease protein; COG4603 ABC-type uncharacterized transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
     0.980
EDM72155.1
Sugar ABC transporter, permease protein; COG1079 Uncharacterized ABC-type transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.971
EDM72152.1
Sugar ABC transporter, ATP-binding protein; COG3845 ABC-type uncharacterized transport systems, ATPase components.
 
 
 0.947
dnaE
DNA polymerase III subunit alpha; COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein.
 
 
 0.922
EDM72355.1
Hypothetical protein; COG1079 Uncharacterized ABC-type transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.847
EDM72353.1
Putative ABC sugar transporter, fused ATPase subunits; COG3845 ABC-type uncharacterized transport systems, ATPase components.
  
 
 0.841
EDM72352.1
COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein.
  
 
 0.604
EDM71742.1
Hypothetical protein.
  
     0.502
EDM71110.1
Binding-protein-dependent transport systems inner membrane component; COG4215 ABC-type arginine transport system, permease component.
  
    0.473
Your Current Organism:
Roseobacter sp. AzwK3b
NCBI taxonomy Id: 351016
Other names: R. sp. AzwK-3b, Roseobacter sp. AzwK-3b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.