Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDM72158.1 | EDM72159.1 | RAZWK3B_18608 | RAZWK3B_18613 | GCN5-related N-acetyltransferase; COG3153 Predicted acetyltransferase. | Oxidoreductase, putative; COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases). | 0.483 |
EDM72158.1 | EDM72160.1 | RAZWK3B_18608 | RAZWK3B_18618 | GCN5-related N-acetyltransferase; COG3153 Predicted acetyltransferase. | Ribosome-associated GTPase; COG0500 SAM-dependent methyltransferases. | 0.508 |
EDM72158.1 | ispDF | RAZWK3B_18608 | RAZWK3B_15990 | GCN5-related N-acetyltransferase; COG3153 Predicted acetyltransferase. | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF); Belongs to the IspF family. In the N-terminal section; belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily. | 0.733 |
EDM72158.1 | rsgA | RAZWK3B_18608 | RAZWK3B_18603 | GCN5-related N-acetyltransferase; COG3153 Predicted acetyltransferase. | Ribosome-associated GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.680 |
EDM72159.1 | EDM72158.1 | RAZWK3B_18613 | RAZWK3B_18608 | Oxidoreductase, putative; COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases). | GCN5-related N-acetyltransferase; COG3153 Predicted acetyltransferase. | 0.483 |
EDM72159.1 | EDM72160.1 | RAZWK3B_18613 | RAZWK3B_18618 | Oxidoreductase, putative; COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases). | Ribosome-associated GTPase; COG0500 SAM-dependent methyltransferases. | 0.774 |
EDM72159.1 | rsgA | RAZWK3B_18613 | RAZWK3B_18603 | Oxidoreductase, putative; COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases). | Ribosome-associated GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.420 |
EDM72160.1 | EDM72158.1 | RAZWK3B_18618 | RAZWK3B_18608 | Ribosome-associated GTPase; COG0500 SAM-dependent methyltransferases. | GCN5-related N-acetyltransferase; COG3153 Predicted acetyltransferase. | 0.508 |
EDM72160.1 | EDM72159.1 | RAZWK3B_18618 | RAZWK3B_18613 | Ribosome-associated GTPase; COG0500 SAM-dependent methyltransferases. | Oxidoreductase, putative; COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases). | 0.774 |
EDM72160.1 | rsgA | RAZWK3B_18618 | RAZWK3B_18603 | Ribosome-associated GTPase; COG0500 SAM-dependent methyltransferases. | Ribosome-associated GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.431 |
ispDF | EDM72158.1 | RAZWK3B_15990 | RAZWK3B_18608 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF); Belongs to the IspF family. In the N-terminal section; belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily. | GCN5-related N-acetyltransferase; COG3153 Predicted acetyltransferase. | 0.733 |
rsgA | EDM72158.1 | RAZWK3B_18603 | RAZWK3B_18608 | Ribosome-associated GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | GCN5-related N-acetyltransferase; COG3153 Predicted acetyltransferase. | 0.680 |
rsgA | EDM72159.1 | RAZWK3B_18603 | RAZWK3B_18613 | Ribosome-associated GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Oxidoreductase, putative; COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases). | 0.420 |
rsgA | EDM72160.1 | RAZWK3B_18603 | RAZWK3B_18618 | Ribosome-associated GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Ribosome-associated GTPase; COG0500 SAM-dependent methyltransferases. | 0.431 |