STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM71581.1Magnesium protoporphyrin IX methyltransferase; COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase. (226 aa)    
Predicted Functional Partners:
bchL
Light-independent protochlorophyllide reductase subunit B; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP.
 
  
 0.996
EDM71612.1
COG0542 ATPases with chaperone activity, ATP-binding subunit.
  
 
 0.996
EDM71579.1
Magnesium-chelatase, subunit H; COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases.
 
 
 0.995
acsF
Magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME); Belongs to the AcsF family.
 
 
 0.995
EDM71583.1
Photosynthetic reaction center H subunit.
 
  
 0.994
EDM71584.1
Possible photosynthetic co.
 
  
 0.985
EDM71611.1
Magnesium-chelatase, ChlI subunit; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
 
 
 0.985
EDM71576.1
Bacteriochlorophyll/chlorophyll a synthase; COG2202 FOG: PAS/PAC domain.
 
  
 0.983
EDM71582.1
LhaA protein.
 
  
 0.983
EDM71569.1
Magnesium-protoporphyrin IX monomethylester oxidative cyclase, 66 kDa subunit(bchE); COG1032 Fe-S oxidoreductase.
 
 
 0.981
Your Current Organism:
Roseobacter sp. AzwK3b
NCBI taxonomy Id: 351016
Other names: R. sp. AzwK-3b, Roseobacter sp. AzwK-3b
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