STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM71625.1COG3563 Capsule polysaccharide export protein. (686 aa)    
Predicted Functional Partners:
EDM71623.1
Polysaccharide biosynthesis/export protein.
 
  
 0.981
EDM70520.1
Capsular polysaccharide export ATP-binding protein; COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
 
  
 0.966
EDM71622.1
COG3562 Capsule polysaccharide export protein.
   
 0.966
EDM73225.1
COG3524 Capsule polysaccharide export protein.
 
  
 0.962
EDM70519.1
COG3524 Capsule polysaccharide export protein.
 
  
 0.955
EDM73224.1
COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
  
 0.951
EDM73176.1
COG0842 ABC-type multidrug transport system, permease component.
 
  
 0.950
EDM70946.1
Putative capsule polysaccharide exporter.
 
  
 0.881
EDM69936.1
COG1596 Periplasmic protein involved in polysaccharide export.
 
  
 0.822
EDM73181.1
Hypothetical protein.
  
    0.770
Your Current Organism:
Roseobacter sp. AzwK3b
NCBI taxonomy Id: 351016
Other names: R. sp. AzwK-3b, Roseobacter sp. AzwK-3b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.