Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RCIX1081Predicted signal transduction histidine kinase. (518 aa)    
Predicted Functional Partners:
RCIX443
Putative response regulator (CheY-like).
 
 
 0.913
RCIX1890
Putative response regulator.
 
 
 0.816
pdhB
Pyruvate dehydrogenase complex E1, transketolase beta subunit.
    
 0.673
trxA-2
Thioredoxin.
  
 
 0.626
gap
Glyceraldehyde-3-phosphate dehydrogenase.
  
 
 0.610
RCIX1840
Putative response regulator (CheY-like).
 
 
 
 0.585
RCIX1082
Putative signal transduction histidine kinase.
 
    
0.582
prsA-1
Ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family.
  
 0.577
prsA-2
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P).
  
 0.577
cheY
Chemotaxis response regulator.
 
 
 
 0.575
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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