Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ppsA-1Phosphoenolpyruvate synthetase (PEP synthase). (890 aa)    
Predicted Functional Partners:
pyk
Pyruvate kinase (pyruvate phosphotransferase); Identical to orf1 of fosmid clone 3D10mr4; Belongs to the pyruvate kinase family.
     
0.775
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
  
  
  0.571
porC-1
Pyruvate:ferredoxin oxidoreductase, gamma subunit.
     
  0.500
porD-1
Pyruvate:ferredoxin oxidoreductase, delta subunit.
     
  0.500
porA-1
Pyruvate:ferredoxin oxidoreductase, alpha subunit.
     
  0.500
porB-1
Pyruvate:ferredoxin oxidoreductase, beta subunit.
     
  0.500
porA-2
Pyruvate:ferredoxin oxidoreductase, alpha subunit.
     
  0.500
porC-2
Pyruvate:ferredoxin oxidoreductase, gamma subunit.
     
  0.500
porD-2
Pyruvate:ferredoxin oxidoreductase, delta subunit.
     
  0.500
RCIX1189
Putative transcription regulator (TrmB family); Similar to orf15 of fosmid clone 3D10mr4.
       0.465
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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