STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCIX1205Conserved ATPase (Mrp family); Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (301 aa)    
Predicted Functional Partners:
hypA
Hydrogenase expression/formation protein (maturation factor); Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
   
 
 0.860
echD
Ech hydrogenase, subunit D.
    
 0.711
echF
Ech hydrogenase, subunit F.
  
 
 0.582
RCIX482
Putative hydrogenase 2(4Fe-4S) ferredoxin component (EchF-like).
  
 
 0.582
RCIX363
Putative sugar-phosphate adenylyltransferase.
  
  
 0.550
RCIX1845
Conserved hypothetical protein.
 
  
 0.529
RCIX1206
Putative DNA glycosylase.
       0.516
miaB
Putative 2-methylthioadenine synthetase.
 
  
 0.515
LRC101
Predicted iron-molybdenum cofactor biosynthesis protein.
 
  
 0.497
LRC525
Conserved hypothetical protein.
 
  
 0.452
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.