Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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RCIX1205Conserved ATPase (Mrp family); Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (301 aa)    
Predicted Functional Partners:
hypA
Hydrogenase expression/formation protein (maturation factor); Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
   
 
 0.789
echD
Ech hydrogenase, subunit D.
    
 0.657
RCIX919
L-fuculose-phosphate aldolase.
 
 
   0.637
RCIX363
Putative sugar-phosphate adenylyltransferase.
  
  
 0.540
RCIX1206
Putative DNA glycosylase.
       0.515
RCIX1845
Conserved hypothetical protein.
 
  
 0.508
echF
Ech hydrogenase, subunit F.
  
 
 0.507
RCIX482
Putative hydrogenase 2(4Fe-4S) ferredoxin component (EchF-like).
  
 
 0.507
miaB
Putative 2-methylthioadenine synthetase.
 
  
 0.491
LRC101
Predicted iron-molybdenum cofactor biosynthesis protein.
 
  
 0.462
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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