Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RCIX1231Putative signal transduction protein. (685 aa)    
Predicted Functional Partners:
RRC245
Predicted aldo/keto reductase.
    
 0.691
LRC522
Putative signal transduction histidine kinase.
  
   
 0.556
RCIX1290
Predicted signal transduction histidine kinase.
 
   
 0.556
RCIX420
Predicted signal transduction histidine kinase,fragment 2.
 
   
 0.522
RCIX1232
Similarities only to hypothetical proteins of haloarcula.
       0.506
RCIX1713
Putative signal transduction histidine kinase.
  
   
 0.506
LRC339
Putative signal transduction histidine kinase.
 
   
 0.493
RCIX2113
Putative signal transduction protein.
  
     0.480
RCIX1160
Putative signal transduction histidine kinase.
  
   
 0.415
LRC120
Predicted signal transduction histidine kinase.
  
     0.406
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.