Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RCIX1261Glycosyltransferase (group 1). (393 aa)    
Predicted Functional Partners:
tatC-2
Sec-independent periplasmic protein translocase; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.
     
 0.655
RCIX1262
Predicted acetyltransferase (GNAT family).
 
     0.558
ugd
UDP-glucose 6-dehydrogenase.
 
  
 0.507
rfbC
dTDP-4-dehydrorhamnose 3,5 epimerase.
 
  
 0.492
RCIX1093
Hypothetical protein.
   
 
 0.473
RRC150
Putative hydrolase.
   
 
 0.473
RCIX1246
Putative glycosyltransferase (family 2).
 
  
 0.462
LRC550
Putative lipopolysaccharide biosynthesis protein.
 
  
 0.459
rfbB-1
dTDP-glucose 4,6-dehydratase.
 
  
 0.459
RCIX2726
Conserved hypothetical protein.
  
 0.459
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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