Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RCIX1324Putative glycosyltransferase (group 1). (378 aa)    
Predicted Functional Partners:
RCIX1328
Putative glycosyltransferase (group 1).
  
  
 
0.916
amyA
Putative alpha-amylase.
 
  
 0.915
RRC150
Putative hydrolase.
 
 
 
 0.601
LRC551
Putative glycosyltransferase (group 1).
  
     0.581
LRC545
Putative glycosyltransferase (group 1).
  
     0.522
ugd
UDP-glucose 6-dehydrogenase.
 
  
 0.487
RCIX2726
Conserved hypothetical protein.
  
 0.483
RCIX1093
Hypothetical protein.
   
 
 0.473
RCIX212
Putative glycosyltransferase (group 1).
  
     0.464
RCIX1961
NDP-N-acetyl-D-galactosaminuronic acid dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.463
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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